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ccb-hms
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BioPlex
R-side access to PPI data from Gygi lab
https://ccb-hms.github.io/BioPlex
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Function to combine two or more PPI networks
#19
lgeistlinger
opened
2 years ago
0
Annotate genomic coordinates for transcriptomic datasets
#18
lgeistlinger
opened
2 years ago
0
Uncollapsed files preserving bait/prey relationships
#17
lgeistlinger
opened
2 years ago
4
Pre-compute connected components
#16
lgeistlinger
closed
2 years ago
1
Provide ID mapping with datasets for easier integration
#15
lgeistlinger
opened
3 years ago
0
Update cache for updated resources only
#14
lgeistlinger
closed
3 years ago
2
Host relative abundance data on BioPlex download page
#13
lgeistlinger
closed
3 years ago
1
annotate uniprot dash identifiers as node metadata
#12
lgeistlinger
closed
3 years ago
1
Split vignette into two vignettes
#11
lgeistlinger
closed
3 years ago
1
Split Bioplex into two packages
#10
lgeistlinger
closed
3 years ago
1
add Spark O2 example
#9
cwillhu
closed
3 years ago
0
Store + load relative protein expression data comparing 293T and HCT116 cells
#8
lgeistlinger
closed
3 years ago
1
Incorporate PFAM mappings
#7
lgeistlinger
closed
3 years ago
1
Pull CCLE proteomics data
#6
lgeistlinger
closed
3 years ago
2
Assess relationship between prey frequency and expression level
#5
lgeistlinger
closed
3 years ago
1
Man pages for getCorum and getBioPlex
#4
lgeistlinger
closed
3 years ago
0
Integrate Robert's code on graph generation from CORUM
#3
lgeistlinger
closed
3 years ago
0
Added info about STAR alignments
#2
cwillhu
closed
3 years ago
0
Integrate junction reads from BAM files
#1
lgeistlinger
closed
2 years ago
4