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Clasificación (from assemblies/Bacteria-Archaea) #19

Open FranciscoSNR opened 1 year ago

FranciscoSNR commented 1 year ago

Correr los códigos de clasificación (data_classify y data_enrichment.py) en las siguiente tabla y siguiente columna Tabla: OTU table with assemblies Columna: Bacteria-Archaea

dasaqui commented 1 year ago 
        assemblyAB_count__Genus
                     source  score prepreprocess        preprocess         algorithm
7  assemblyAB_count__Family  77.61      original         LogAndPca          mlpc_200
9   assemblyAB_count__Genus  76.66      original         LogAndPca          mlpc_200
5   assemblyAB_count__Order  76.61      original         LogAndPca        svc_linear
4   assemblyAB_count__Order  75.78      original         LogAndPca          mlpc_200
8   assemblyAB_count__Genus  75.76      original         LogAndPca        svc_linear
6  assemblyAB_count__Family  74.12      original         LogAndPca        svc_linear
3   assemblyAB_count__Class  60.95      original         LogAndPca        svc_linear
2   assemblyAB_count__Class  60.79      original         LogAndPca           svc_rbf
1  assemblyAB_count__Phylum  45.40      original         LogAndPca          mlpc_200
0  assemblyAB_count__Phylum  42.66      original  PowerTransformer  randomForest1200