ccm-bioinfo / cambda2023

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Clasificación (from assemblies/Eukarya) #21

Open FranciscoSNR opened 1 year ago

FranciscoSNR commented 1 year ago

Correr los códigos de clasificación (data_classify y data_enrichment.py) en las siguiente tabla y siguiente columna Tabla: OTU table with assemblies Columna: Eukarya

dasaqui commented 1 year ago
        assemblyEukarya_count__Family
                          source  score prepreprocess preprocess algorithm
1   assemblyEukarya_count__Order  23.82      original  LogAndPca     knn_5
7   assemblyEukarya_count__Class  22.75      original  LogAndPca     knn_5
5  assemblyEukarya_count__Phylum  21.48      original  LogAndPca     knn_5
3   assemblyEukarya_count__Genus  21.31      original  LogAndPca     knn_5
0   assemblyEukarya_count__Order  21.17      original  LogAndPca     knn_3
6   assemblyEukarya_count__Class  20.18      original  LogAndPca     knn_3
9  assemblyEukarya_count__Family  19.89      original  LogAndPca     knn_5
4  assemblyEukarya_count__Phylum  19.62      original  LogAndPca     knn_3
2   assemblyEukarya_count__Genus  19.26      original  LogAndPca     knn_3
8  assemblyEukarya_count__Family  18.93      original  LogAndPca     knn_3