Finish kraken , CARD

[nselem]

• Kraken2-Extraction by Organism-binning by city-assembly
  Alnitak /data/camda2023/extraction/assemblies/*.fasta [X] CARD [ ] Blastn @Fontove

• Binning by city-Assembly-
  Alnitak /data/camda2023/us-cities/assemblies/*.fasta
  [] Finish NewYork binning [] Kraken2 @aapashkov [] blastn @Fontove [] CARD @aapashkov

[aapashkov]

• Kraken2-Extraction by Organism-binning by city-assembly:
  • Documentation
  • CARD counts table
  • CARD presence-absence table
• Binning by city-Assembly-classification-extraction-CARD:
  • Documentation
  • CARD counts table
  • CARD presence-absence table