ccmbioinfo / crg2

Research pipeline for exploring clinically relevant genomic variants
Apache License 2.0
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add MELT to crg2 #176

Closed ShaniaWu closed 1 year ago

ShaniaWu commented 1 year ago

Note: To target MELT report generation, specify target rule (melt_report) in dnaseq_slurm_hpf.sh. Specifying target file will not work as the MELT target output is a folder and dates are included in the final report file name. See example of Snakemake command:

snakemake --use-conda -s ${SF} --cores 4 --conda-prefix ${CP} --configfile ${CONFIG} --profile ${SLURM} -p melt_report