ccmbioinfo / crg2

Research pipeline for exploring clinically relevant genomic variants
Apache License 2.0
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Non-coding variant effect prediction: DeepCT #197

Open Madelinehazel opened 9 months ago

Madelinehazel commented 9 months ago

See if you can get DeepCT working to annotate a VCF with score, then benchmark using non-coding variant test set. Helper pipeline: https://github.com/AIRI-Institute/DeepCT-inference-helper