Open Madelinehazel opened 2 weeks ago
Update gnomAD SV annotations to v4.1 (from https://storage.googleapis.com/gcp-public-data--gnomad/release/4.1/genome_sv/gnomad.v4.1.sv.sites.bed.gz). Note: The BED file has duplicated END and SVTYPE columns, which I remove prior to annotation against sample SVs in line 504 of scripts/SVAnnotator.py.
scripts/SVAnnotator.py
Update gnomAD SV annotations to v4.1 (from https://storage.googleapis.com/gcp-public-data--gnomad/release/4.1/genome_sv/gnomad.v4.1.sv.sites.bed.gz). Note: The BED file has duplicated END and SVTYPE columns, which I remove prior to annotation against sample SVs in line 504 of
scripts/SVAnnotator.py.