ccmbioinfo / osmp

One-Sided Matching Portal
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React / API: Mark phenotypes with "NO" if they are present in the query but not present in the participant #312

Closed frewmack closed 2 years ago

frewmack commented 2 years ago

Currently, any phenotype that appears for a particular case is included in the "Phenotypes" column on the frontend. However, in PhenoTips, there are sometimes phenotypes that are marked explicitly as not being present (eg. "Short Stature", "NO Tall Stature"), yet these are listed the same way in OSMP (eg. "Short Stature", "Tall Stature"). The frontend should show phenotypes that are marked with "NO" the same way they are presented in PhenoTips.

https://docs.phenotips.com/reference/getpatient-1 Marked in the "observed" field.