Closed PabloIriso closed 3 years ago
That message is specific to autodock4, which is not autodock-gpu. They are different programs that use the same scoring function.
I recommend to use autodock-gpu instead of autodock4, or even vina which now supports the autodock4 scoring function.
Closing, feel free to re-open if needed.
Thanks Diego
After running autodock4 in autodocktools I'm getting this in my .dlf file.
BEGINNING GENETIC ALGORITHM DOCKING 1 of 10 Run: 1 Seed: 1234900043 807448529 [ Run 1 of 10 GA/GALS ] NOTE: All energies are equal in population; re-initializing. (Try Number 1) NOTE: All energies are equal in population; re-initializing. (Try Number 2) NOTE: All energies are equal in population; re-initializing. (Try Number 3) NOTE: All energies are equal in population; re-initializing. (Try Number 4) NOTE: All energies are equal in population; re-initializing. (Try Number 5) NOTE: All energies are equal in population; re-initializing. (Try Number 6) NOTE: All energies are equal in population; re-initializing. (Try Number 7) NOTE: All energies are equal in population; re-initializing. (Try Number 8)
What can I do to solve this?
I'm getting the same error for different ligands.
Found this:
http://autodock.scripps.edu/faqs-help/how-to/fixing-all-energies-are-equal-in-population-re-initializing-message
However, I have no call_glss.cc file inside my autodock repositories