ccsb-scripps / AutoDock-Vina

AutoDock Vina
http://vina.scripps.edu
Apache License 2.0
596 stars 209 forks source link

Internal error running vina #267

Open jorgefriaslopez opened 8 months ago

jorgefriaslopez commented 8 months ago

Running the following command: $ vina --ligand ZINC000004340309.pdbqt --maps AF-A0A510JDD9 --scoring ad4 --exhaustiveness 32 --out AF-A0A510JDD9.pdbqt

with maps obtained using autodock4, I get the following error:

Scoring function : ad4 Ligand: ZINC000004340309.pdbqt Exhaustiveness: 32 CPU: 0 Verbosity: 1

Reading AD4.2 maps ... done.

An internal error occurred in ../../../src/lib/parse_pdbqt.cpp(69).

diogomart commented 8 months ago

Can you post ZINC000004340309.pdbqt?