In January 2022 and February 2022, the NCI Risk Table authors sent us two updated versions of the risk tables posted under the Main Tables section of https://lhncbc.nlm.nih.gov/LHC-research/LHC-projects/image-processing/cervixca.html. In this PR, we bring the new risk tables into the risk-tables/ directory and run the generate-cql-risk-tables.py Python script to update cql/AutogeneratedRiskTables.cql, so that our CDS can use these new risk tables.
Several modifications are made to cql/AutogeneratedTableLookup.cql to support the modified and additional rows that are included in these updates. Tests are also modified and added to support these updated rows.
In January 2022 and February 2022, the NCI Risk Table authors sent us two updated versions of the risk tables posted under the Main Tables section of https://lhncbc.nlm.nih.gov/LHC-research/LHC-projects/image-processing/cervixca.html. In this PR, we bring the new risk tables into the
risk-tables/directory and run thegenerate-cql-risk-tables.pyPython script to updatecql/AutogeneratedRiskTables.cql, so that our CDS can use these new risk tables.Several modifications are made to
cql/AutogeneratedTableLookup.cqlto support the modified and additional rows that are included in these updates. Tests are also modified and added to support these updated rows.This PR resolves Issue https://github.com/ccsm-cds-tools/ccsm-cds-with-tests/issues/28 and also solves a critical patient test script failure by changing a management recommendation from
3-year follow-upto1-year follow-upin Table 4.