cct-datascience / organization

Initial repository for organizing group activities
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add season 9 plot info for N and S #39

Closed dlebauer closed 5 years ago

dlebauer commented 5 years ago

Placeholder for https://github.com/terraref/reference-data/issues/269

Chris-Schnaufer commented 5 years ago

@kimberlyh66 Please assign to sprint and estimate this ticket

kimberlyh66 commented 5 years ago

@dlebauer I am not sure what distance the north range sites (55-94) need to be moved. Can you help me with this?

dlebauer commented 5 years ago

You are correct this is confusing - I've updated the issue to ask for more guidance https://github.com/terraref/reference-data/issues/269#issuecomment-520157956. Also, Maria will be in town Thursday so you can follow up with her then.

kimberlyh66 commented 5 years ago

@dlebauer

Here are sql statements to add season 9 plots for north and south fields. Run the statements in the following order:

Add season 9 north field plots: season9_northfield.txt

Move north field plots 231.2 meters north:

update sites
set geometry = st_translate(geometry, 0, +0.002211)
where sitename like 'MAC Field Scanner Season 9%';

Add season 9 south field plots:

with season9 as (
  select city, state, replace(sitename, 'Season 7', 'Season 9') as sitename, greenhouse, geometry, time_zone from sites where sitename like '%Season 7%' 
)
insert into sites (city, state, sitename, greenhouse, geometry, time_zone) select * from season9;
dlebauer commented 5 years ago

@kimberlyh66 did you plot the results over one of the current season full-field maps to check that this is correct?

kimberlyh66 commented 5 years ago

@dlebauer Can you point to where in the documentation instructions on how to check are found?

dlebauer commented 5 years ago

https://docs.terraref.org/user-manual/how-to-access-data/using-betydb-trait-data-experimental-metadata/accessing-betydb-via-arcmap-and-other-gis-software --


David LeBauer Director of Data Sciences Arizona Experiment Station THE UNIVERSITY OF ARIZONA

Bioscience Research Labs, 207 1230 N Cherry Ave | Tucson, AZ 85721 Office: 520-621-4381 dlebauer@email.arizona.edu orcid https://orcid.org/0000-0001-7228-053X | twitter https://twitter.com/dlebauer | github https://github.com/dlebauer | linkedin https://www.linkedin.com/in/dlebauer/

kimberlyh66 commented 5 years ago

Is the north field shorter in length than the south field?

You mentioned that ranges should go from 55-94 in the north field. However, the south field has ranges 1-54 and adding 54 to each of these range numbers results in the north field having ranges 55-108.

I think this stretches the north field further than it should?

season9_northfield
dlebauer commented 5 years ago

@kimberlyh66 apparently there are only 94 ranges ... https://docs.google.com/document/d/1YDivOXxt0n052WJyHkiz7eolOzNOvVEvS0v4TQ0Hldg/edit

kimberlyh66 commented 5 years ago

@dlebauer Here are updated sql statements. The statements should be run in the following order:

Add season 9 north field plots: season9_northfield_updated.txt

Move north field plots ~231.2 meters north:

update sites
set geometry = st_translate(geometry, 0, +0.00210)
where sitename like 'MAC Field Scanner Season 9%';

Add season 9 south field plots:

with season9 as (
  select city, state, replace(sitename, 'Season 7', 'Season 9') as sitename, greenhouse, geometry, time_zone from sites where sitename like '%Season 7%' 
)
insert into sites (city, state, sitename, greenhouse, geometry, time_zone) select * from season9;

Here is an image of the season 9 north field plots over a full field image:

season9_northfield
dlebauer commented 5 years ago

I've added these sites - do we also need to add experiments_sites and sites_cultivars records? Can you please create a new issue for that?

kimberlyh66 commented 5 years ago

Yes, experiments_sites and sites_cultivars records need to be added. I will create the new issue.