ws448 x :) $ dials.python fail.py
28%|██████████▊ | 1000/3600 [01:37<04:14, 10.21it/s]
Traceback (most recent call last):
File "/tmp/x/fail.py", line 11, in <module>
i.get_raw_data(j)
File "/dls_sw/apps/dials/dials-v3-17-0-2/modules/dxtbx/src/dxtbx/format/FormatMultiImage.py", line 47, in read
return format_instance.get_raw_data(index)
File "/dls_sw/apps/dials/dials-v3-17-0-2/modules/dxtbx/src/dxtbx/format/FormatNXmx.py", line 115, in get_raw_data
raw_data = dxtbx.nexus.get_raw_data(
File "/dls_sw/apps/dials/dials-v3-17-0-2/modules/dxtbx/src/dxtbx/nexus/__init__.py", line 578, in get_raw_data
sliced_outer = data[index]
File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper
File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper
File "/dls_sw/apps/dials/dials-v3-17-0-2/conda_base/lib/python3.10/site-packages/h5py/_hl/dataset.py", line 768, in __getitem__
return self._fast_reader.read(args)
File "h5py/_selector.pyx", line 361, in h5py._selector.Reader.read
File "h5py/_selector.pyx", line 151, in h5py._selector.Selector.apply_args
IndexError: Index (1000) out of range for (0-999)
where fail.py consists of
from tqdm import tqdm
from dxtbx.model.experiment_list import ExperimentList
el = ExperimentList.from_file("imported.expt")
e = el[0]
i = e.imageset
for j in tqdm(range(len(i))):
i.get_raw_data(j)
Or it partially supports it:
where
fail.py
consists of