I am attempting to build a Cyanobacterial universe. The build_universe --draft command produces the error below. build_universe --curated --cyanobacteria also produces an error.
(CarveMe) Averys-MacBook-Pro:testing_dir averynoonan$ build_universe --draft
Downloading universal data from BiGG...
100%
Downloading model-specific data from BiGG...
100%
Traceback (most recent call last):
File "/Users/averynoonan/anaconda3/envs/CarveMe/bin/build_universe", line 8, in <module>
sys.exit(main())
File "/Users/averynoonan/anaconda3/envs/CarveMe/lib/python3.7/site-packages/carveme/cli/build_universe.py", line 207, in main
outputfile=args.output)
File "/Users/averynoonan/anaconda3/envs/CarveMe/lib/python3.7/site-packages/carveme/cli/build_universe.py", line 34, in maincall
gprs = create_gpr_table(data, outputfile=bigg_gprs)
File "/Users/averynoonan/anaconda3/envs/CarveMe/lib/python3.7/site-packages/carveme/universe/bigg_download.py", line 293, in create_gpr_table
for protein in gpr.proteins:
AttributeError: 'NoneType' object has no attribute 'proteins'`
I am attempting to build a Cyanobacterial universe. The
build_universe --draft
command produces the error below.build_universe --curated --cyanobacteria
also produces an error.