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cdanielmachado
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framed
framed: a metabolic modeling package for python
http://framed.readthedocs.io/
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Several problems for DFBA
#39
jinb88187
closed
3 years ago
1
integrate development branch
#38
cdanielmachado
closed
5 years ago
0
Can't load models
#37
cmrac
closed
5 years ago
0
merge py3 branch into master
#36
cdanielmachado
closed
6 years ago
0
errors in importing framed
#35
hongzhonglu
closed
6 years ago
2
Sara py3
#34
cdanielmachado
closed
6 years ago
0
Sara py3
#33
cdanielmachado
closed
6 years ago
0
Merge smetana branch into master branch
#32
cdanielmachado
closed
6 years ago
0
update smetana branch from master
#31
cdanielmachado
closed
6 years ago
0
fix_sink_reactions method does not work with our model
#30
SophiaSantos
closed
6 years ago
1
rebuild API
#29
cdanielmachado
closed
7 years ago
0
Fix smetana
#28
cdanielmachado
closed
7 years ago
0
Sara dev
#27
cdanielmachado
closed
7 years ago
0
Fix ode model class
#26
cdanielmachado
closed
7 years ago
0
Community
#25
cdanielmachado
closed
7 years ago
0
Metabolites without an associated kinetic law
#24
patricialima
opened
7 years ago
0
Constant parameter in metabolite
#23
saragcorreia
opened
7 years ago
0
Add constraint argument to simplify function
#22
EmanuelGoncalves
closed
5 years ago
1
Warnings
#21
cdanielmachado
closed
7 years ago
0
Specify set of reactions for simplifying model
#20
cdanielmachado
closed
7 years ago
0
merge refactoring 0.3 into master
#19
cdanielmachado
closed
8 years ago
0
simultaneous reactant and product
#18
cdanielmachado
closed
10 years ago
1
bug in plaintext models
#17
cdanielmachado
closed
8 years ago
0
gapFind/Fill, glpk (lazy) interfaces, unit test + files
#16
martamatos
closed
10 years ago
0
config file for solver initialization
#15
cdanielmachado
closed
8 years ago
1
Marta branch
#14
martamatos
closed
10 years ago
0
Added setup.py to framed.
#13
phantomas1234
closed
11 years ago
0
Objective function should be defined in ConstraintBasedModel
#12
phantomas1234
closed
11 years ago
4
unassigned metabolite compartments in sbml
#11
cdanielmachado
closed
8 years ago
3
Marta branch
#10
martamatos
closed
11 years ago
0
Implement OSI wrapper
#9
cdanielmachado
closed
8 years ago
4
Implement GLPK wrapper
#8
cdanielmachado
closed
11 years ago
0
add support for ratio constraint
#7
kaizhuang
closed
11 years ago
1
FBA/pFBA "target" -> "objRxn"
#6
kaizhuang
closed
11 years ago
0
Implement "parallelization" module.
#5
cdanielmachado
closed
8 years ago
1
Add support for sbml-fbc package
#4
cdanielmachado
closed
8 years ago
1
Add __repr__ method in Solution
#3
cdanielmachado
closed
11 years ago
0
FVA ~20% faster by not calculating the min and maxima in an alternating ...
#2
phantomas1234
closed
11 years ago
2
Pickling solver instances
#1
phantomas1234
closed
11 years ago
0