cdanielmachado / smetana

SMETANA: a tool to analyse interactions in microbial communities
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Issues when running with a 10 member community #32

Open amarsh26 opened 2 years ago

amarsh26 commented 2 years ago

Hi,

When I use smetana with the detailed flag on my ten member community, it sometimes stops after 4 members and gives the following error for the rest of the members.

MUS: Failed to find a minimal growth medium for microbe_model warn('MUS: Failed to find a minimal growth medium for ' + org_id)

However, it has also went through nine members before before throwing the error shown above.

Do you have suggestions as to the cause and recommendations on how I can get more consistent results?

Thank you!