I've been attempting to install gpuR on a new system for the last few months without success. I've tried every iteration of dev and stable versions of the gpuR package and viennaCL and I keep getting the same error. Install starts, goes well, right untill the end at which time I encounter:
installing source package 'gpuR' ...
package 'gpuR' successfully unpacked and MD5 sums checked
using staged installation
WARNING: this package has a configure script
It probably needs manual configuration
** libs
*** arch - i386
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c chol.cpp -o chol.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c context.cpp -o context.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c custom_math.cpp -o custom_math.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c device.cpp -o device.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuEigenPtr.cpp -o gpuEigenPtr.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuMatrix_igemm.cpp -o gpuMatrix_igemm.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c norm.cpp -o norm.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c platform.cpp -o platform.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c set_row_order.cpp -o set_row_order.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c solve.cpp -o solve.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c synchronize.cpp -o synchronize.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c trunc_gpuMat.cpp -o trunc_gpuMat.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils-vcl.cpp -o utils-vcl.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils.cpp -o utils.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vclPtr.cpp -o vclPtr.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas1.cpp -o vienna_blas1.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas2.cpp -o vienna_blas2.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas3.cpp -o vienna_blas3.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_eigen.cpp -o vienna_eigen.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_qr.cpp -o vienna_qr.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_stats.cpp -o vienna_stats.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_svd.cpp -o vienna_svd.o
cd ../inst/include/loader && mkdir -p ./i386 && /Rtools/bin/make ./i386/libOpenCL.a \
CC="C:/Rtools/mingw_32/bin/gcc " CFLAGS=" -O3 -Wall -std=gnu99 -mtune=generic" AR="C:/Rtools/mingw_32/bin/ar" RM="rm -f" \
ICD_OS=icd_windows
make[1]: Entering directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader'
C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd.c -o i386/icd.o
C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd_dispatch.c -o i386/icd_dispatch.o
icd_dispatch.c: In function 'clGetExtensionFunctionAddressForPlatform':
icd_dispatch.c:1417:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations]
CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR);
^
icd_dispatch.c: In function 'clGetExtensionFunctionAddress':
icd_dispatch.c:1623:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations]
CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR);
^
C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd_windows.c -o i386/icd_windows.o
rm -f i386/libOpenCL.a
C:/Rtools/mingw_32/bin/ar rcs i386/libOpenCL.a i386/icd.o i386/icd_dispatch.o i386/icd_windows.o
make[1]: Leaving directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader'
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o gpuR.dll tmp.def RcppExports.o chol.o context.o custom_math.o device.o gpuEigenPtr.o gpuMatrix_igemm.o norm.o platform.o set_row_order.o solve.o synchronize.o trunc_gpuMat.o utils-vcl.o utils.o vclPtr.o vienna_blas1.o vienna_blas2.o vienna_blas3.o vienna_eigen.o vienna_qr.o vienna_stats.o vienna_svd.o -L../inst/include/loader/i386 -lOpenCL -LC:/PROGRA~1/R/R-36~1.1/bin/i386 -lR
installing to C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/00LOCK-gpuR/00new/gpuR/libs/i386
* arch - x64
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c chol.cpp -o chol.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c context.cpp -o context.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c custom_math.cpp -o custom_math.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c device.cpp -o device.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuEigenPtr.cpp -o gpuEigenPtr.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuMatrix_igemm.cpp -o gpuMatrix_igemm.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c norm.cpp -o norm.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c platform.cpp -o platform.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c set_row_order.cpp -o set_row_order.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c solve.cpp -o solve.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c synchronize.cpp -o synchronize.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c trunc_gpuMat.cpp -o trunc_gpuMat.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils-vcl.cpp -o utils-vcl.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils.cpp -o utils.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vclPtr.cpp -o vclPtr.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas1.cpp -o vienna_blas1.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas2.cpp -o vienna_blas2.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas3.cpp -o vienna_blas3.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_eigen.cpp -o vienna_eigen.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_qr.cpp -o vienna_qr.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_stats.cpp -o vienna_stats.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_svd.cpp -o vienna_svd.o
cd ../inst/include/loader && mkdir -p ./x64 && /Rtools/bin/make ./x64/libOpenCL.a \
CC="C:/Rtools/mingw_64/bin/gcc " CFLAGS=" -O2 -Wall -std=gnu99 -mtune=generic" AR="C:/Rtools/mingw_64/bin/ar" RM="rm -f" \
ICD_OS=icd_windows
make[1]: Entering directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader'
C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd.c -o x64/icd.o
C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd_dispatch.c -o x64/icd_dispatch.o
icd_dispatch.c: In function 'clGetExtensionFunctionAddressForPlatform':
icd_dispatch.c:1417:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations]
CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR);
^
icd_dispatch.c: In function 'clGetExtensionFunctionAddress':
icd_dispatch.c:1623:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations]
CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR);
^
C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd_windows.c -o x64/icd_windows.o
rm -f x64/libOpenCL.a
C:/Rtools/mingw_64/bin/ar rcs x64/libOpenCL.a x64/icd.o x64/icd_dispatch.o x64/icd_windows.o
make[1]: Leaving directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader'
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o gpuR.dll tmp.def RcppExports.o chol.o context.o custom_math.o device.o gpuEigenPtr.o gpuMatrix_igemm.o norm.o platform.o set_row_order.o solve.o synchronize.o trunc_gpuMat.o utils-vcl.o utils.o vclPtr.o vienna_blas1.o vienna_blas2.o vienna_blas3.o vienna_eigen.o vienna_qr.o vienna_stats.o vienna_svd.o -L../inst/include/loader/x64 -lOpenCL -LC:/PROGRA~1/R/R-36~1.1/bin/x64 -lR
installing to C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/00LOCK-gpuR/00new/gpuR/libs/x64
R
inst
byte-compile and prepare package for lazy loading
Creating a generic function for 'eigen' from package 'base' in package 'gpuR'
Creating a generic function for '%o%' from package 'base' in package 'gpuR'
Creating a generic function for 'tcrossprod' from package 'base' in package 'gpuR'
Creating a generic function for 'nrow' from package 'base' in package 'gpuR'
Creating a generic function for 'ncol' from package 'base' in package 'gpuR'
Creating a generic function for 'crossprod' from package 'base' in package 'gpuR'
Creating a generic function for 'cov' from package 'stats' in package 'gpuR'
Creating a generic function for 'colSums' from package 'base' in package 'gpuR'
Creating a generic function for 'rowSums' from package 'base' in package 'gpuR'
Creating a generic function for 'colMeans' from package 'base' in package 'gpuR'
Creating a generic function for 'rowMeans' from package 'base' in package 'gpuR'
Creating a generic function for 'dist' from package 'stats' in package 'gpuR'
Creating a generic function for 'diag' from package 'base' in package 'gpuR'
Creating a generic function for 'diag<-' from package 'base' in package 'gpuR'
Creating a generic function for 'det' from package 'base' in package 'gpuR'
Creating a generic function for 'norm' from package 'base' in package 'gpuR'
Creating a generic function for 'qr.R' from package 'base' in package 'gpuR'
Creating a generic function for 'qr.Q' from package 'base' in package 'gpuR'
Creating a generic function for 'typeof' from package 'base' in package 'gpuR'
Creating a generic function for 'colnames<-' from package 'base' in package 'gpuR'
help
* installing help indices
converting help for package 'gpuR'
finding HTML links ... done
Arith-methods html
Compare-methods html
Math-methods html
Summary-methods html
as.gpuMatrix-methods html
as.gpuVector-methods html
as.vclVector-methods html
assert_has_double html
cgpuMatrix-class html
chol-methods html
colnames-methods html
cov-methods html
currentContext html
currentDevice html
currentPlatform html
custom_opencl html
cvclMatrix-class html
det-methods html
detectCPUs html
detectGPUs html
detectPlatforms html
deviceHasDouble html
deviceInfo html
deviceType html
dgpuMatrix-class html
dgpuVector-class html
diag-methods html
dim-methods html
dist-vclMatrix html
dvclMatrix-class html
dvclVector-class html
eigen-gpuMatrix html
extract-methods html
fgpuMatrix-class html
fgpuVector-class html
fvclMatrix-class html
fvclVector-class html
gpuMatrix-class html
gpuMatrix-crossprod html
gpuMatrix-methods html
gpuMatrix.colSums html
gpuR-block html
gpuR-deepcopy html
gpuR-package html
gpuR-slice html
gpuVector-class html
gpuVector-methods html
grapes-o-grapes-methods html
grapes-times-grapes-methods html
has_cpu_skip html
has_double_skip html
has_gpu_skip html
has_multiple_double_skip html
has_multiple_gpu_skip html
identity_matrix html
igpuMatrix-class html
igpuVector-class html
inplace-methods html
ivclMatrix-class html
ivclVector-class html
length-methods html
listContexts html
log-methods html
norm-methods html
nrow-gpuR html
permute-methods html
platformInfo html
pmax html
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/pmax.Rd:21: file link 'pmax' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/pmax.Rd:21: file link 'pmin' in package 'base' does not exist and so has been treated as a topic
pmin.vclVector html
pocl_check html
print.gpuMatrix html
qr-methods html
qr.R-methods html
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/qr.R-methods.Rd:26: file link 'qr.R' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/qr.R-methods.Rd:26: file link 'qr.Q' in package 'base' does not exist and so has been treated as a topic
setContext html
set_device_context html
setup_opencl html
solve-methods html
svd-methods html
synchronize html
t-methods html
typeof-gpuR-methods html
vclMatrix-class html
vclMatrix-crossprod html
vclMatrix-methods html
vclMatrix.colSums html
vclVector-class html
vclVector-methods html
zgpuMatrix-class html
zvclMatrix-class html building package indices
installing vignettes
** testing if installed package can be loaded from temporary location
*** arch - i386
Error: package or namespace load failed for 'gpuR':
.onAttach failed in attachNamespace() for 'gpuR', details:
call: initContexts()
error: ViennaCL: FATAL ERROR: ViennaCL encountered an unknown OpenCL error. Most likely your OpenCL SDK or driver is not installed properly. In some cases, this error is due to an invalid global work size or several kernel compilation errors.
If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information:
Operating System
Which OpenCL implementation (AMD, NVIDIA, etc.)
ViennaCL version
Many thanks in advance!
Error: loading failed
Execution halted
*** arch - x64
Error: package or namespace load failed for 'gpuR':
.onAttach failed in attachNamespace() for 'gpuR', details:
call: initContexts()
error: ViennaCL: FATAL ERROR: ViennaCL encountered an unknown OpenCL error. Most likely your OpenCL SDK or driver is not installed properly. In some cases, this error is due to an invalid global work size or several kernel compilation errors.
If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information:
Operating System
Which OpenCL implementation (AMD, NVIDIA, etc.)
ViennaCL version
Many thanks in advance!
Error: loading failed
Execution halted
ERROR: loading failed for 'i386', 'x64'
removing 'C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/gpuR'
Warning in install.packages :
installation of package ‘gpuR’ had non-zero exit status
Dear cdeterman
I've been attempting to install gpuR on a new system for the last few months without success. I've tried every iteration of dev and stable versions of the gpuR package and viennaCL and I keep getting the same error. Install starts, goes well, right untill the end at which time I encounter:
installing source package 'gpuR' ... package 'gpuR' successfully unpacked and MD5 sums checked using staged installation
WARNING: this package has a configure script It probably needs manual configuration
** libs
*** arch - i386 C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c chol.cpp -o chol.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c context.cpp -o context.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c custom_math.cpp -o custom_math.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c device.cpp -o device.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuEigenPtr.cpp -o gpuEigenPtr.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuMatrix_igemm.cpp -o gpuMatrix_igemm.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c norm.cpp -o norm.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c platform.cpp -o platform.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c set_row_order.cpp -o set_row_order.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c solve.cpp -o solve.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c synchronize.cpp -o synchronize.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c trunc_gpuMat.cpp -o trunc_gpuMat.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils-vcl.cpp -o utils-vcl.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils.cpp -o utils.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vclPtr.cpp -o vclPtr.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas1.cpp -o vienna_blas1.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas2.cpp -o vienna_blas2.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas3.cpp -o vienna_blas3.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_eigen.cpp -o vienna_eigen.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_qr.cpp -o vienna_qr.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_stats.cpp -o vienna_stats.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_svd.cpp -o vienna_svd.o cd ../inst/include/loader && mkdir -p ./i386 && /Rtools/bin/make ./i386/libOpenCL.a \ CC="C:/Rtools/mingw_32/bin/gcc " CFLAGS=" -O3 -Wall -std=gnu99 -mtune=generic" AR="C:/Rtools/mingw_32/bin/ar" RM="rm -f" \ ICD_OS=icd_windows make[1]: Entering directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader' C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd.c -o i386/icd.o C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd_dispatch.c -o i386/icd_dispatch.o icd_dispatch.c: In function 'clGetExtensionFunctionAddressForPlatform': icd_dispatch.c:1417:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations] CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR); ^ icd_dispatch.c: In function 'clGetExtensionFunctionAddress': icd_dispatch.c:1623:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations] CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR); ^ C:/Rtools/mingw_32/bin/gcc -I../ -O3 -Wall -std=gnu99 -mtune=generic -c icd_windows.c -o i386/icd_windows.o rm -f i386/libOpenCL.a C:/Rtools/mingw_32/bin/ar rcs i386/libOpenCL.a i386/icd.o i386/icd_dispatch.o i386/icd_windows.o make[1]: Leaving directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader' C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o gpuR.dll tmp.def RcppExports.o chol.o context.o custom_math.o device.o gpuEigenPtr.o gpuMatrix_igemm.o norm.o platform.o set_row_order.o solve.o synchronize.o trunc_gpuMat.o utils-vcl.o utils.o vclPtr.o vienna_blas1.o vienna_blas2.o vienna_blas3.o vienna_eigen.o vienna_qr.o vienna_stats.o vienna_svd.o -L../inst/include/loader/i386 -lOpenCL -LC:/PROGRA~1/R/R-36~1.1/bin/i386 -lR installing to C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/00LOCK-gpuR/00new/gpuR/libs/i386
* arch - x64 C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c chol.cpp -o chol.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c context.cpp -o context.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c custom_math.cpp -o custom_math.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c device.cpp -o device.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuEigenPtr.cpp -o gpuEigenPtr.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c gpuMatrix_igemm.cpp -o gpuMatrix_igemm.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c norm.cpp -o norm.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c platform.cpp -o platform.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c set_row_order.cpp -o set_row_order.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c solve.cpp -o solve.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c synchronize.cpp -o synchronize.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c trunc_gpuMat.cpp -o trunc_gpuMat.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils-vcl.cpp -o utils-vcl.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c utils.cpp -o utils.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vclPtr.cpp -o vclPtr.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas1.cpp -o vienna_blas1.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas2.cpp -o vienna_blas2.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_blas3.cpp -o vienna_blas3.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_eigen.cpp -o vienna_eigen.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_qr.cpp -o vienna_qr.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_stats.cpp -o vienna_stats.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I. -I../inst/include -Wa,-mbig-obj -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -UNDEBUG -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RcppEigen/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/RViennaCL/include" -I"C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/BH/include" -O2 -Wall -mtune=generic -c vienna_svd.cpp -o vienna_svd.o cd ../inst/include/loader && mkdir -p ./x64 && /Rtools/bin/make ./x64/libOpenCL.a \ CC="C:/Rtools/mingw_64/bin/gcc " CFLAGS=" -O2 -Wall -std=gnu99 -mtune=generic" AR="C:/Rtools/mingw_64/bin/ar" RM="rm -f" \ ICD_OS=icd_windows make[1]: Entering directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader' C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd.c -o x64/icd.o C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd_dispatch.c -o x64/icd_dispatch.o icd_dispatch.c: In function 'clGetExtensionFunctionAddressForPlatform': icd_dispatch.c:1417:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations] CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR); ^ icd_dispatch.c: In function 'clGetExtensionFunctionAddress': icd_dispatch.c:1623:5: warning: 'clGetKernelSubGroupInfoKHR' is deprecated (declared at ../CL/cl_ext.h:330) [-Wdeprecated-declarations] CL_COMMON_EXTENSION_ENTRYPOINT_ADD(clGetKernelSubGroupInfoKHR); ^ C:/Rtools/mingw_64/bin/gcc -I../ -O2 -Wall -std=gnu99 -mtune=generic -c icd_windows.c -o x64/icd_windows.o rm -f x64/libOpenCL.a C:/Rtools/mingw_64/bin/ar rcs x64/libOpenCL.a x64/icd.o x64/icd_dispatch.o x64/icd_windows.o make[1]: Leaving directory '/Users/ETIENN~1.PIE/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/inst/include/loader' C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o gpuR.dll tmp.def RcppExports.o chol.o context.o custom_math.o device.o gpuEigenPtr.o gpuMatrix_igemm.o norm.o platform.o set_row_order.o solve.o synchronize.o trunc_gpuMat.o utils-vcl.o utils.o vclPtr.o vienna_blas1.o vienna_blas2.o vienna_blas3.o vienna_eigen.o vienna_qr.o vienna_stats.o vienna_svd.o -L../inst/include/loader/x64 -lOpenCL -LC:/PROGRA~1/R/R-36~1.1/bin/x64 -lR installing to C:/Users/Etienne A.D. Pienaar/Documents/R/win-library/3.6/00LOCK-gpuR/00new/gpuR/libs/x64 R inst byte-compile and prepare package for lazy loading Creating a generic function for 'eigen' from package 'base' in package 'gpuR' Creating a generic function for '%o%' from package 'base' in package 'gpuR' Creating a generic function for 'tcrossprod' from package 'base' in package 'gpuR' Creating a generic function for 'nrow' from package 'base' in package 'gpuR' Creating a generic function for 'ncol' from package 'base' in package 'gpuR' Creating a generic function for 'crossprod' from package 'base' in package 'gpuR' Creating a generic function for 'cov' from package 'stats' in package 'gpuR' Creating a generic function for 'colSums' from package 'base' in package 'gpuR' Creating a generic function for 'rowSums' from package 'base' in package 'gpuR' Creating a generic function for 'colMeans' from package 'base' in package 'gpuR' Creating a generic function for 'rowMeans' from package 'base' in package 'gpuR' Creating a generic function for 'dist' from package 'stats' in package 'gpuR' Creating a generic function for 'diag' from package 'base' in package 'gpuR' Creating a generic function for 'diag<-' from package 'base' in package 'gpuR' Creating a generic function for 'det' from package 'base' in package 'gpuR' Creating a generic function for 'norm' from package 'base' in package 'gpuR' Creating a generic function for 'qr.R' from package 'base' in package 'gpuR' Creating a generic function for 'qr.Q' from package 'base' in package 'gpuR' Creating a generic function for 'typeof' from package 'base' in package 'gpuR' Creating a generic function for 'colnames<-' from package 'base' in package 'gpuR' help * installing help indices converting help for package 'gpuR' finding HTML links ... done Arith-methods html
Compare-methods html
Math-methods html
Summary-methods html
as.gpuMatrix-methods html
as.gpuVector-methods html
as.vclVector-methods html
assert_has_double html
cgpuMatrix-class html
chol-methods html
colnames-methods html
cov-methods html
currentContext html
currentDevice html
currentPlatform html
custom_opencl html
cvclMatrix-class html
det-methods html
detectCPUs html
detectGPUs html
detectPlatforms html
deviceHasDouble html
deviceInfo html
deviceType html
dgpuMatrix-class html
dgpuVector-class html
diag-methods html
dim-methods html
dist-vclMatrix html
dvclMatrix-class html
dvclVector-class html
eigen-gpuMatrix html
extract-methods html
fgpuMatrix-class html
fgpuVector-class html
fvclMatrix-class html
fvclVector-class html
gpuMatrix-class html
gpuMatrix-crossprod html
gpuMatrix-methods html
gpuMatrix.colSums html
gpuR-block html
gpuR-deepcopy html
gpuR-package html
gpuR-slice html
gpuVector-class html
gpuVector-methods html
grapes-o-grapes-methods html
grapes-times-grapes-methods html
has_cpu_skip html
has_double_skip html
has_gpu_skip html
has_multiple_double_skip html
has_multiple_gpu_skip html
identity_matrix html
igpuMatrix-class html
igpuVector-class html
inplace-methods html
ivclMatrix-class html
ivclVector-class html
length-methods html
listContexts html
log-methods html
norm-methods html
nrow-gpuR html
permute-methods html
platformInfo html
pmax html
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/pmax.Rd:21: file link 'pmax' in package 'base' does not exist and so has been treated as a topic Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/pmax.Rd:21: file link 'pmin' in package 'base' does not exist and so has been treated as a topic pmin.vclVector html
pocl_check html
print.gpuMatrix html
qr-methods html
qr.R-methods html
Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/qr.R-methods.Rd:26: file link 'qr.R' in package 'base' does not exist and so has been treated as a topic Rd warning: C:/Users/Etienne A.D. Pienaar/AppData/Local/Temp/Rtmp8cpfRG/R.INSTALL203c6d723390/gpuR/man/qr.R-methods.Rd:26: file link 'qr.Q' in package 'base' does not exist and so has been treated as a topic setContext html
set_device_context html
setup_opencl html
solve-methods html
svd-methods html
synchronize html
t-methods html
typeof-gpuR-methods html
vclMatrix-class html
vclMatrix-crossprod html
vclMatrix-methods html
vclMatrix.colSums html
vclVector-class html
vclVector-methods html
zgpuMatrix-class html
zvclMatrix-class html
building package indices installing vignettes ** testing if installed package can be loaded from temporary location *** arch - i386 Error: package or namespace load failed for 'gpuR': .onAttach failed in attachNamespace() for 'gpuR', details: call: initContexts() error: ViennaCL: FATAL ERROR: ViennaCL encountered an unknown OpenCL error. Most likely your OpenCL SDK or driver is not installed properly. In some cases, this error is due to an invalid global work size or several kernel compilation errors. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information:
Please help.