ocaisa
commented
3 years ago The GCC issue is the first on the list in https://gcc.gnu.org/gcc-10/porting_to.html
Closed moseshou closed 2 years ago
ocaisa
commented
3 years ago The GCC issue is the first on the list in https://gcc.gnu.org/gcc-10/porting_to.html
ocaisa
commented
3 years ago Injecting -fcommon as a build option to override the new default fixes this for an existing release (3.4.1 at least), but it really needs a proper fix. I'm also using EasyBuild and a successful build for me with GCC 10 looked like:
cmake -DCMAKE_INSTALL_PREFIX=/users/ocaisa/.local/easybuild/software/WI4MPI/3.4.1-GCC-10.2.0 -DCMAKE_BUILD_TYPE=Release -DCMAKE_C_COMPILER='gcc' -DCMAKE_C_FLAGS='-O2 -ftree-vectorize -march=native -fno-math-errno -fcommon' -DCMAKE_CXX_COMPILER='g++' -DCMAKE_CXX_FLAGS='-O2 -ftree-vectorize -march=native -fno-math-errno -fcommon' -DCMAKE_Fortran_COMPILER='gfortran' -DCMAKE_Fortran_FLAGS='-O2 -ftree-vectorize -march=native -fno-math-errno -fcommon' -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=FALSE -DOPENMPI_ROOT=$EBROOTOPENMPI -DWI4MPI_COMPILER=GNU -DWI4MPI_REALEASE=RELEASE /users/ocaisa/.local/easybuild/build/WI4MPI/3.4.1/GCC-10.2.0/wi4mpi-3.4.1/
adrien-cotte
commented
3 years ago Thank you for your contribution, gonna fix it :)
Hello, I used GNU GCC 10.2.0 and OpenMPI 4.0.5 to compile the source I git-cloned:
mkdir build cd build cmake -DOPENMPI_ROOT=/apps/eb/OpenMPI/4.0.5-GCC-10.2.0 -DWI4MPI_COMPILER=GNU -DWI4MPI_REALEASE=RELEASE .. make -j 10
I got the same error during linking libwi4mpi_MPICH_INTEL.so, which is also reported in issue #10:
[ 29%] Linking C shared library libwi4mpi_MPICH_INTEL.so /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Unpack_external' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Pack_external_size' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Pack_external' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Lookup_name' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Win_set_name' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Unpublish_name' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Publish_name' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: error: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/debug_printer.c.o: multiple definition of '_LOCAL_MPI_Open_port' /apps/eb/binutils/2.35-GCCcore-10.2.0/bin/ld.gold: CMakeFiles/wi4mpi_MPICH_INTEL.dir/common/asm_jit.c.o: previous definition here
cat CMakeCache.txt
This is the CMakeCache file. For build in directory: /scratch/zhuofei/wi4mpi/build It was generated by CMake: /apps/eb/CMake/3.10.3-GCCcore-8.3.0/bin/cmake You can edit this file to change values found and used by cmake. If you do not want to change any of the values, simply exit the editor. If you do want to change a value, simply edit, save, and exit the editor. The syntax for the file is as follows: KEY:TYPE=VALUE KEY is the name of a variable in the cache. TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!. VALUE is the current value for the KEY.
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Thanks so much for your help!