upgrade hdf5 - Githubissues

cedadev / jasmin_scivm

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upgrade hdf5 #45

Closed alaniwi closed 8 years ago

alaniwi commented 8 years ago

Update hdf5. The RPM for this is already built and ready (hdf5-1.8.12-1.ceda.el6.x86_64.rpm), but it involves a change in .so version (libhdf5*.so.8 replacing .7), so will need to rebuild a bunch of other packages:

gdal* netcdf python27-netCDF4 octave [from recollection, a slow compilation] cdo

alaniwi commented 8 years ago

netcdf done (and upgraded to 4.3.3)
gdal done
python27-netCDF4 done
cdo done

alaniwi commented 8 years ago

octave build aborted (after over an hour!) because it detected library / header version mismatch on the builder: hdf5-devel 1.8.9 installed was but hdf-1.8.12. Just as well it spotted this.

Retrying with hdf-devel 1.8.12 installed.

Need to repeat build of all the above packages, and also fix rpm dependencies of hdf5-devel so it depends on the specific version of hdf5, not just hdf5.