cellannotation / CAS-LinkML

1 stars 0 forks source link

Property typing issue - pipeline fix needed. #2

Open dosumis opened 4 months ago

dosumis commented 4 months ago

In conversion to OWL (with Protege) untyped properties in ttl files end up with Declarations setting their OWL type as Annotation Property. Importing property from RO brings in a conflicting declaration of these as Object Properties.

Below is the result after import of RO - Protege still treats these as APs.

image

This can be fixed by manually deleting the conflicting AP assertion. So, we need a pipeline that avoids generating the spurious declarations as APs.