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cellannotation / cas-tools

Cell Annotation Schema Tools
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"Module not found error" when trying to install cas-tools package #54

Closed AvolaAmg closed 3 months ago

AvolaAmg commented 3 months ago

I had a few errors for installing the cas-tools package on pycharm. The modules cellxgene_census and cas_schema were not found. I installed cellxgene_census but I could not find cas_schema. Could you help ?

Thanks!

Screenshot 2024-03-15 at 15 58 43 Screenshot 2024-03-15 at 15 58 35

@ubyndr

ubyndr commented 3 months ago

How did you attempt to install the cas-tools package in PyCharm?

AvolaAmg commented 3 months ago

Thanks for your quick response. On the PyCharm command line I used cas --help. I used the python version 3.9. It was the first time I used it on this machine so the first thing I installed was just cas-tools, no other packages were present.

ubyndr commented 3 months ago

Did you use pip install cas-tools?

AvolaAmg commented 3 months ago

No I used the GUI: PyCharm settings>Project: pythonProject>Python Interpreter > + Package. and there it was giving errors. image

I just did it using pip install cas-tools and it works in that way. Thanks!