Closed akhst7 closed 3 years ago
loom conversion only supports loom v2, and there has developed some version dependency issues over time.
We might address it in the next release or two.
In the meantime, you could try convert it to AnnData, then use anndata's write_loom()
function.
Hi,
I have his sce file ;
and coveted to loom by ;
convertFormat(ldat.mod.se, from = "sce", to="loom", outFile = "~/Desktop/ldat.loom")
I tried ReadVelocity from SeuratWrappers and Velocyte.R but got the similar error;
Let me know how to approach this.
Thanks.