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cellgeni / sceasy

A package to help convert different single-cell data formats to each other
GNU General Public License v3.0
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Error in AnnData to Seurat #43

Closed Zethson closed 2 years ago

Zethson commented 2 years ago 
> sceasy::convertFormat("MHV_68_2021_11_04_de.h5ad", from="anndata", to="seurat", outFile='2021_11_04_de.rds')
X -> counts
Error in vapply(X = keyed.objects, FUN = function(x) { : 
  values must be length 1,
 but FUN(X[[1]]) result is length 0

I can provide the object if required.

Thank you!

nh3 commented 2 years ago

Sorry for the long delay. This is now addressed (hopefully) by #52.