sce to anndata missing colPair in tbsp

cellgeni / sceasy

A package to help convert different single-cell data formats to each other

GNU General Public License v3.0

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sce to anndata missing colPair in tbsp #46

Open Zepeng-Mu opened 2 years ago

Zepeng-Mu commented 2 years ago

Hi, I'm wondering how does sceasy handles graphs from Sce to AnnData. For example, I have an sce with colPair storing a KNN graph, but this is missing in the converted AnnData.obsp slot. Thanks so much!