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cellgeni / sceasy

A package to help convert different single-cell data formats to each other
GNU General Public License v3.0
382 stars 57 forks source link

Updating dependencies #57

Closed errcricket closed 2 years ago

errcricket commented 2 years ago

Is there a chance that sceasy will be updated to use current versions of anndata and scipy? As of February 2022, the most recent version of of anndata is 0.9 and scipy is 1.8.

nh3 commented 2 years ago

Thank you for raising this.

The requirements for specific versions of anndata and scipy in the README had been out-dated for a long while and has just been removed (with the newly released v0.0.7).

Actually, the package itself poses no restriction on anndata and scipy versions. If you install from source it should just install regardless of python package versions. The version requirements in the bioconda recipe will be removed with the new release.