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cellgeni / sceasy

A package to help convert different single-cell data formats to each other
GNU General Public License v3.0
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Fix issue #56 #60

Closed Lila14 closed 1 year ago

Lila14 commented 1 year ago

There was an issue converting some files when a field is a dataframe instead of a matrix. I used as.matrix to automatically convert to a matrix. Also, I find that the most up-to-date versions of anndata and scipy work better, so I changed that in the README.

nh3 commented 1 year ago

Thank you for the fix! Yes, it wasn't envisaged that obsm would contain a pandas dataframe.