Would it be possible to get a new release of SCEasy so that it is picked up by bioconda?

cellgeni / sceasy

A package to help convert different single-cell data formats to each other

GNU General Public License v3.0

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Would it be possible to get a new release of SCEasy so that it is picked up by bioconda? #62

Open pcm32 opened 2 years ago

pcm32 commented 2 years ago

Pretty please @nh3 ???

This would enable the newer conversions available to be used from Galaxy and others.

Thanks! Pablo

nh3 commented 2 years ago

Thank you for prompting! Yes, it has been too long since its last release.

Just released v0.0.7. Hopefully bioconda will pick it up soon.

Best, Ni

nh3 commented 2 years ago

Seems it's picked up by bioconda auto-bumping https://github.com/bioconda/bioconda-recipes/pull/36759, but I think some manual edits would be desired:

1) Remove version capping for anndata and scipy (those are for that "exchangeable loom" stuff which had been decommissioned) 2) Add monocle3 as a dependency (optional?)

I think 1) is necessary, but please let me know your thoughts on 2). @pcm32

pcm32 commented 2 years ago

Thanks for acting so promptly @nh3 . We have some people interested in working with monocle3 CDS, so I would support 2 as well.