search

cellgeni / sceasy

A package to help convert different single-cell data formats to each other
GNU General Public License v3.0
346 stars 52 forks source link

Spatial data #71

Open AndrewSkelton opened 1 year ago

AndrewSkelton commented 1 year ago

Hi,

I've got some spatial data that I'm trying to convert to anndata format from Seurat. Is this use case supported?

Thanks,

Andrew

howtofindme commented 9 months ago

Hi,

I've got some spatial data that I'm trying to convert to anndata format from Seurat. Is this use case supported?

Thanks,

Andrew

hi have you solved this problem?

Vimalajeno commented 7 months ago

Could you please tell me how to convert a spatial seurat object into a scanpy for an integrated seurat object (two images)? Also, how should I handle these images in scanpy?