cellgeni / sceasy

A package to help convert different single-cell data formats to each other
GNU General Public License v3.0
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Converting Xenium object from R #87

Open man154 opened 4 months ago

man154 commented 4 months ago

Hi, I'm trying convert a Xenium object from R. I'm getting the error below. Any suggestions? The Xenium object was created using the Seurat spatial vignette workflow

sceasy::convertFormat(xenium.obj[["Xenium"]], from="seurat", to="anndata", outFile='output.h5ad') Error in compareVersion(as.character(obj@version), "3.0.0") : no slot of name "version" for this object of class "Assay5"