search

cellmodeller / CellModeller

GPU-accelerated multicellular modelling framework
http://cellmodeller.github.io/CellModeller/
Other
56 stars 48 forks source link

missing dependencies #16

Closed ryvinec closed 5 years ago

ryvinec commented 6 years ago

Two libraries were missing after executing the linux installer InstallCellModeller.sh : libgfortran.so.1 : fixed following instructions there https://github.com/menpo/landmarkerio-server/issues/23 libOpenCL.so : fixed following instructions there https://askubuntu.com/questions/796770/how-to-install-libopencl-so-on-ubuntu

After that, it work!

timrudge commented 5 years ago

Hi there - sorry for the delay, thanks for spotting the libgfortan problem, another user also recently pointed this out. I will fix up the dependencies. Let me know if you have any other problems

Tim Rudge, PhD Assistant Professor, Institute for Biological and Medical Engineering / Department of Chemical and Bioprocess Engineering Universidad Católica de Chile +56946560677

On Wed, Sep 19, 2018 at 6:47 PM ryvinec notifications@github.com wrote:

Two libraries were missing after executing the linux installer InstallCellModeller.sh : libgfortran.so.1 : fixed following instructions there menpo/landmarkerio-server#23 https://github.com/menpo/landmarkerio-server/issues/23 libOpenCL.so : fixed following instructions there https://askubuntu.com/questions/796770/how-to-install-libopencl-so-on-ubuntu

After that, it work!

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/HaseloffLab/CellModeller/issues/16, or mute the thread https://github.com/notifications/unsubscribe-auth/AGwLATUNfbTSVj_7qxmfhy15PDDBJcoIks5ucrt3gaJpZM4WxB1W .

jinz2014 commented 5 years ago

HI Tim,

Are there computationally intensive kernels in your OpenCL kernels ?

Thanks

timrudge commented 5 years ago

Added libgfortan dependency