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cellmodeller / CellModeller

GPU-accelerated multicellular modelling framework
http://cellmodeller.github.io/CellModeller/
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Unable to install cell modeller in Mac #21

Closed ghost closed 3 years ago

ghost commented 5 years ago

Hi, I am unable to install cellmodeller in Mac OS X . It shows Error: CellModeller.GUI.Renderers module not found.

Please help !

timrudge commented 5 years ago

Hi - could you give me more info on how you attempted to install? Which version of conda? How are you running the code when you get this error?

best Tim

Tim Rudge, PhD Assistant Professor, Institute for Biological and Medical Engineering / Department of Chemical and Bioprocess Engineering Universidad Católica de Chile tel: +56 2 23544576 cel: +56 9 46560677

On Wed, Aug 21, 2019 at 12:36 PM ameyshenoy notifications@github.com wrote:

Hi, I am unable to install cellmodeller in Mac OS X . It shows Error: CellModeller.GUI.Renderers module not found.

Please help !

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/HaseloffLab/CellModeller/issues/21?email_source=notifications&email_token=ABWAWAMPWE6C2MIT4YJPCTLQFVVIDA5CNFSM4IOJSBW2YY3PNVWWK3TUL52HS4DFUVEXG43VMWVGG33NNVSW45C7NFSM4HGSCFFQ, or mute the thread https://github.com/notifications/unsubscribe-auth/ABWAWAIDLVE66RH7YDLO6VDQFVVIDANCNFSM4IOJSBWQ .

ghost commented 4 years ago

Hi! I'm facing the same problem on my mac os 10.14.5

timrudge commented 4 years ago

Hi - can you please let me know how you installed cellmodeller, and send the full error message after running cmgui?

Tim Rudge, PhD Assistant Professor, Institute for Biological and Medical Engineering / Department of Chemical and Bioprocess Engineering Universidad Católica de Chile tel: +56 2 23544576 cel: +56 9 46560677

On Wed, Oct 2, 2019 at 11:59 PM Faisal Romshoo notifications@github.com wrote:

Hi! I'm facing the same problem on my mac os 10.14.5

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/HaseloffLab/CellModeller/issues/21?email_source=notifications&email_token=ABWAWAJCLQAW3GBAX5PXVIDQMVNXVA5CNFSM4IOJSBW2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEAG2AVQ#issuecomment-537763926, or mute the thread https://github.com/notifications/unsubscribe-auth/ABWAWAMB3U3IRRVWEUJFYDDQMVNXVANCNFSM4IOJSBWQ .

ghost commented 4 years ago

I tried installing it according to the installation guide (using anaconda). I am getting the error ImportError: No module named PyQt4.QtGui

SGrasshopper commented 4 years ago

Hi I also tried to install on OS X and first got the No module named PyQt4.QtGui error. After installing PyQt4. I now get the error: Traceback (most recent call last): File "CellModellerGUI.py", line 12, in import CellModeller.GUI.Renderers ImportError: No module named CellModeller.GUI.Renderers Any ideas on how to install Cellmodeller. I am using conda 4.8.0. I get the error when i try and start cellmodeller from either CellModellerGUI.py, or cmgui.

timrudge commented 4 years ago

Hi - I am now working on a Python 3 version that should resolve these issues. I still need to do some testing, but it should be done soon. In the meantime, you can checkout the python3 branch and try it. I recommend you create an environment and then "python setup.py install" to install CellModeller. Then you can test via Scripts/batch.py or Scripts/CellModellerGUI.py.

Sorry that this is so late in response, unfortunately we have not had the manpower to maintain the code recently.

SGrasshopper commented 4 years ago

Thanks, I will give a try.