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cerebis / bin3C

Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.
GNU Affero General Public License v3.0
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Coverage outlier identification #2

Closed cerebis closed 3 years ago

cerebis commented 6 years ago

Per issue #1 this would be nice to have as a subsequent analysis step.

cerebis commented 3 years ago

As time has passed, it is not clear that this feature would provide any benefit.

1) very high coverage contigs can important community members (such as active viruses). 2) eliminating high coverage outliers is really a considering of the scaffold3C problem and so not relevant to binning in bin3C.