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cerebis / bin3C

Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.
GNU Affero General Public License v3.0
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Target FASTA path can become stale if files moved #8

Closed cerebis closed 4 years ago

cerebis commented 5 years ago

When creating a contact map, the object stores the path to the target FASTA (contigs) used in creating the map. If at a later date, the relative positions of the contact map and FASTA change, methods such as cluster_report will fail due to "file not found".

cerebis commented 4 years ago

Users can now explicitly specify a location for reference FASTA .