The 50% GC prediction is informative but not used to its best.
When a user supplies the wrong enzyme, the number of observed reads starting with cut-site is likely to be close to this value (assuming true mean GC is not far off 50%). We should flag to users when these values are close.
The 50% GC prediction is informative but not used to its best.
When a user supplies the wrong enzyme, the number of observed reads starting with cut-site is likely to be close to this value (assuming true mean GC is not far off 50%). We should flag to users when these values are close.