search

cerebis / qc3C

Reference-free quality assessment for Hi-C sequencing data
GNU Affero General Public License v3.0
12 stars 1 forks source link

Fuzzier evidence of junctions #18

Closed cerebis closed 5 years ago

cerebis commented 5 years ago

We could apply a looser definition of evidence, rather than only considering those which are fully captured within a read.

  1. We could accept partial junction matches.
  2. We could look at the mate, if the insert size is small relative to read length