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cerebis / sim3C

Read-pair simulation of 3C-based sequencing methodologies (HiC, Meta3C, DNase-HiC)
GNU General Public License v3.0
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FastQ header should be revised #15

Closed cerebis closed 8 months ago

cerebis commented 4 years ago

The headers used for FastQ should be revised to better comply with the Illumina format.

  1. control_bits should simply be set to 0 (not 18)
  2. index (final field) is typed as a string composed of A,C, G, T. We should make this ACGT.