This duplicates columns giving them x/y suffixes. The idea is to instead fill in precategorized_taxa with
any new columns from preclustered_isolation_taxa, and use values from preclustered_isolation_taxa
for other columns, where they are different.
We need to keep changes to risk, filter_category and error columns.
We need to add any columns that don't exist in the original table, and in the non-matching rows fill them with NAs.
https://github.com/cesaraustralia/GeneticRiskIndex/blob/92c39eba778452e430dce973742dbdd4e4abc518/R/prefilter.R#L71
This duplicates columns giving them x/y suffixes. The idea is to instead fill in
precategorized_taxawith any new columns frompreclustered_isolation_taxa, and use values frompreclustered_isolation_taxafor other columns, where they are different.We need to keep changes to
risk,filter_categoryanderrorcolumns.We need to add any columns that don't exist in the original table, and in the non-matching rows fill them with NAs.