Report more context for MSD and PSI type errors

cfe-lab / CFEIntact

A bioinformatics tool for detecting defects in HIV-1 proviral sequences.

https://cfe-lab.github.io/CFEIntact

MIT License

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Report more context for MSD and PSI type errors #12

Closed Donaim closed 7 months ago

Donaim commented 8 months ago

Currently an MSD error looks like this:

Query sequence has a mutated splice donor site, AT.

It would be nice to have more information here, such as the positions of discovered MSD and PSI sites, the nucletide/aminocid sequences around them, and maybe the expected vs found values. Something useful like that.

Donaim commented 7 months ago

Done.