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cfe-lab / MiCall

Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C
https://cfe-lab.github.io/MiCall
GNU Affero General Public License v3.0
14 stars 9 forks source link

Bump scipy from 1.10.1 to 1.13.1 #1105

Closed dependabot[bot] closed 5 months ago

dependabot[bot] commented 6 months ago

Bumps scipy from 1.10.1 to 1.13.1.

Release notes

Sourced from scipy's releases.

SciPy 1.13.1 Release Notes

SciPy 1.13.1 is a bug-fix release with no new features compared to 1.13.0. The version of OpenBLAS shipped with the PyPI binaries has been increased to 0.3.27.

Authors

  • Name (commits)
  • h-vetinari (1)
  • Jake Bowhay (2)
  • Evgeni Burovski (6)
  • Sean Cheah (2)
  • Lucas Colley (2)
  • DWesl (2)
  • Ralf Gommers (7)
  • Ben Greiner (1) +
  • Matt Haberland (2)
  • Gregory R. Lee (1)
  • Philip Loche (1) +
  • Sijo Valayakkad Manikandan (1) +
  • Matti Picus (1)
  • Tyler Reddy (62)
  • Atsushi Sakai (1)
  • Daniel Schmitz (2)
  • Dan Schult (3)
  • Scott Shambaugh (2)
  • Edgar Andrés Margffoy Tuay (1)

A total of 19 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete.

SciPy 1.13.0 Release Notes

SciPy 1.13.0 is the culmination of 3 months of hard work. This out-of-band release aims to support NumPy 2.0.0, and is backwards compatible to NumPy 1.22.4. The version of OpenBLAS used to build the PyPI wheels has been increased to 0.3.26.dev.

This release requires Python 3.9+ and NumPy 1.22.4 or greater.

For running on PyPy, PyPy3 6.0+ is required.

Highlights of this release

... (truncated)

Commits
  • 44e4eba REL: SciPy 1.13.1 release commit [wheel build]
  • 2eb8e1b Merge pull request #20632 from tylerjereddy/treddy_prep_1_13_1_backports
  • 1a00d48 DOC: PR 20632 updates
  • 11e99ba BUG: stats: Fix zipf.pmf and zipfian.pmf for int32 k (#20702) [wheel bu...
  • 506cbeb MAINT: stats.wilcoxon: fix bug with Ndim>1, shape[axis]>50, NaN, 'auto' (#20592)
  • c9d8613 CI, MAINT: PR 20632 revisions
  • 95c50a4 MAINT: PR 20632 revisions [wheel build]
  • e7abaf1 MAINT: PR 20632 revisions [wheel build]
  • aa32933 CI: PR 20632 revisions [wheel build]
  • 023b0fb CI: MR 20632 revisions
  • Additional commits viewable in compare view


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dependabot[bot] commented 5 months ago

Superseded by #1128.