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cfe-lab / MiCall

Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C
https://cfe-lab.github.io/MiCall
GNU Affero General Public License v3.0
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Bump numpy from 2.1.2 to 2.1.3 #1195

Closed dependabot[bot] closed 3 weeks ago

dependabot[bot] commented 3 weeks ago

Bumps numpy from 2.1.2 to 2.1.3.

Release notes

Sourced from numpy's releases.

2.1.3 (Nov 2, 2024)

NumPy 2.1.3 Release Notes

NumPy 2.1.3 is a maintenance release that fixes bugs and regressions discovered after the 2.1.2 release. This release also adds support for free threaded Python 3.13 on Windows.

The Python versions supported by this release are 3.10-3.13.

Improvements

  • Fixed a number of issues around promotion for string ufuncs with StringDType arguments. Mixing StringDType and the fixed-width DTypes using the string ufuncs should now generate much more uniform results.

    (gh-27636)

Changes

  • numpy.fix now won't perform casting to a floating data-type for integer and boolean data-type input arrays.

    (gh-26766)

Contributors

A total of 15 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Abhishek Kumar +
  • Austin +
  • Benjamin A. Beasley +
  • Charles Harris
  • Christian Lorentzen
  • Marcel Telka +
  • Matti Picus
  • Michael Davidsaver +
  • Nathan Goldbaum
  • Peter Hawkins
  • Raghuveer Devulapalli
  • Ralf Gommers
  • Sebastian Berg
  • dependabot[bot]
  • kp2pml30 +

Pull requests merged

A total of 21 pull requests were merged for this release.

... (truncated)

Commits
  • 98464cc Merge pull request #27690 from charris/prepare-2.1.3
  • cbda85b REL: Prepare for the NumPy 2.1.3 release [wheel build]
  • daa8699 Merge pull request #27672 from charris/backport-27666
  • 614ca19 Merge pull request #27673 from charris/backport-27636
  • e6b02d7 DOC: add release note
  • 54fd729 BUG: substantially simplify and fix issue with justification promoter
  • a90fe7c BUG: fix more issues with string ufunc promotion
  • a121864 BUG: fixes for StringDType/unicode promoters
  • f055fb9 BUG: Fix a reference count leak in npy_find_descr_for_scalar.
  • 5895c02 Merge pull request #27669 from charris/backport-27663
  • Additional commits viewable in compare view


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