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cgat-developers / cgat-flow

cgat-flow repository
MIT License
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bugfix runFeatureCounts in PipelineRnaseq.py #30

Closed sebastian-luna-valero closed 6 years ago

sebastian-luna-valero commented 6 years ago

@Acribbs are you able to test this?

Acribbs commented 6 years ago

Apart from small pep8 seems to work. Is this how we should specify temp directories now?

sebastian-luna-valero commented 6 years ago

Great! Thanks for confirming.

Yes, please see discussions about TMPDIR in https://github.com/cgat-developers/cgat-core/pull/30

If you don't mind, I will close https://github.com/cgat-developers/cgat-flow/pull/29 in favour of this one.

Acribbs commented 6 years ago

Perfect thanks for your help.

Acribbs commented 6 years ago

oops sorry I closed by accident

sebastian-luna-valero commented 6 years ago

Thanks!