cgat-developers / ruffus

CGAT-ruffus is a lightweight python module for running computational pipelines
MIT License
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Relative paths in history #119

Open alexmemory opened 4 years ago

alexmemory commented 4 years ago

The history seems to store relative paths, which can cause up-to-date tasks to rerun if we run from a different working directory. Is there a way to have the history store absolute paths instead (or any other pointers to avoid the issue)? Thank you! https://github.com/cgat-developers/ruffus/blob/9367f8290b3e8edbbb95a4acd9db510f79c27599/ruffus/task.py#L4820