19 November 2013, 2x50, C38E3ACXX, Skok, Charlotte

[smondet]

• [x] subsheet to Jane Skok Jane.Skok@nyumc.org, "Proudhon, Charlotte" charlotte.proudhon@nyumc.org https://docs.google.com/a/nyu.edu/spreadsheet/ccc?key=0AlgGw5GklnXhdEFaVzJYM09FQ0VUQk9MaVI0enlLY0E&usp=drive_web#gid=0
• [ ] validate Submission Sheet(s)
• [ ] if needed, remove previous run directories on rabbot:/hiseq to make space
• [ ] if needed, remove previous run directories on bowery:/scratch to make space
• [ ] remove previous runs on the hiseq machine
• [x] do tar.gz on Pod
• [x] transfer targz
• [x] untar targx
• [x] mv tar to gencore-raw
• [ ] backup tarball to sftp.bio
• [x] compute md5 on Pod
• [x] compute md5 on bowery
• [x] validate Submission Sheet(s) again and remove edit permissions
• [x] import Submission Sheet(s) and register flowcell
• [x] demultiplex
• [x] fastx
• [x] review statistics
• [x] deliver
• [x] send emails