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NYU CGSB Genomics Core Facility
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2014-06-06 A8P33 MiSeq - Coruzzi
#158
Closed
swapyy
closed
10 years ago
swapyy
commented
10 years ago
Before the run
[x] Send submission sheet
[x] Make sure there is space on the MiSeq hard-drive
After the run
[x] Copy run directory to gencore-raw
[x] START tar the run on pod
[x] FINISH tar the run on pod
[x] START pull run tar file from pod to bowery
[x] FINISH pull run tar file from pod to bowery
[x] START untar run on bowery
[x] FINISH untar run on bowery
[x] move tar.gz file to /data/cgsb/gencore-raw/miseq-M02455
[x] Inspect FASTQ files in /scratch/gencore/miseq-M02455/RUN_DIR/Data/Intensities/BaseCalls/
[x] Create run directory in /data/cgsb/gencore/out/PI_NAME/DATE_RUN_NAME/
[x] Copy FASTQ files to run directory and set access rights as setfacl -m u:
:r,...
[x] Email user the location of the run directory
Before the run
After the run