Given a structure, fetch an alignment of homologues

chadadavis / sbglib

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Given a structure, fetch an alignment of homologues #204

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago

And identify level of conservation at each point in the alignment and extract a 
list of positions with a certain minimum conservation.

Use HMM web services?

Original issue reported on code.google.com by chad.a.davis@gmail.com on 23 Feb 2011 at 5:02

GoogleCodeExporter commented 9 years ago

See also
https://github.com/bioperl/Bio-Tools-HMM

Original comment by chad.a.davis@gmail.com on 31 Mar 2011 at 5:21