chaimeleon-eu / workstation-images

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error regarding image_batch_shap_explainability_radiomics #4

Closed The-D-lab closed 11 months ago

The-D-lab commented 1 year ago

Hi ,

When I tried to run the job on (image_batch_shap_explainability_radiomics) i get teh following error on console ,

image

Furthermore , regarding the following error you mentioned in the previous issue. I'm not sure how to solve this on the docker file as I have followed the same standard in other repositories.
----Log begin----

python: can't open file '/workspace/main.py': [Errno 2] No such file or directory

----Log end----

It would be great if you can help to sort this out.

Thank You

Palollo commented 1 year ago

That error message appears when there is not any dataset selected to work with when the workstation is created. It is already notified in the jobman project: https://github.com/chaimeleon-eu/jobman/issues/29

Palollo commented 1 year ago

Regarding the error "python: can't open file '/workspace/main.py'"... If you build your image locally and run, you will see that the file main.py is in the root directory /, and not in /workspace/. You can remove workspace/ in the entrypoint of your dockerfile, or see my recommendation in the previous issue and move your app files to a new directory (named workspace in this case instead of app).

The-D-lab commented 1 year ago

Hi , We have fixed the requested changes/recommendations , please build and upload the image.

Thank you

Palollo commented 11 months ago

The docker image has been rebuilt with tags '0.0.2-testing' and 'latest': imagen

Also the issue https://github.com/chaimeleon-eu/jobman/issues/29 was fixed.