Issue when trying to use the build-protein-db command in the Database module

chan-csu / ADToolbox

AD Toolbox: A python package for modeling and optimization on anaerobic digestion process

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Issue when trying to use the build-protein-db command in the Database module #8

Closed sstenmark45 closed 6 months ago

sstenmark45 commented 7 months ago

@ParsaGhadermazi I am receiving an error when:

ADToolbox Database build-protein-db

Error message:

 File "...", line 8, in <module>
    sys.exit(main())
             ^^^^^^
  File "...", line 160, in main
    ecs=core.Database.ec_from_csv(configs.Database().csv_reaction_db)
        ^^^^^^^^^^^^^^^^^^^^^^^^^
AttributeError: type object 'Database' has no attribute 'ec_from_csv'

ParsaGhadermazi commented 6 months ago

Fixed