search

changlabtw / hicmaptools

5 stars 1 forks source link

Memory Corruption #6

Closed 14stutzmanav closed 11 months ago

14stutzmanav commented 2 years ago

Hi there,

I have been using hicmaptools successfully on my local device and attempted to use it in my campus's computational cluster this afternoon. When I did so, I encountered the a "memory corruption" error. I asked our IT support services what caused the issue (it works on my local machine so I thought it was related to the installation), but they said I should ask the developer of the package. Is this anything you are familiar with? Details are as follows.

Input

hicmaptools -in_hic inter_30.hic -TAD dm6-500000.bed -output triangles/dm6-500000-zenk-wt.tsv -random 0

The output is in the following file: slurm-45594786.txt

Thanks so much! Alexis Stutzman

jmchangTW commented 2 years ago

Dear Alexis,

Do you re-compile HiCmapTools executable in the cluster system? The error messages seems an incompatible running environment. If there is still an error message after re-compile, is it possible to share inter_30.hic & dm6-500000.bed to me? I might test it locally.

Regards!