Closed bkmartinjr closed 8 months ago
In addition, there appear to have been two changes to the TissueMapper
(code copied into Builder from WMG, as we don't have a DRY package containing this).
In the WMG version, the HIGH_LEVEL_TISSUES
list:
"UBERON_0035328", # upper outer quadrant of breast
"UBERON_0000916", # abdomen
Should we make the same change in Census builder, alongside the above version change?
yes please!
The schema 4.0.0 update did not bump the UBERON version used by the tissue mapper. Per the 4.0 schema, it should be v2023-09-05, but is currently using the schema 3 UBERON (v2023-06-28).
The pinned URL should be: https://github.com/obophenotype/uberon/releases/download/v2023-09-05/uberon.owl
CC: @brianraymor @pablo-gar