[python] Reduce warnings during doc builds + fix broken links

[ivirshup]

This PR:

• Moves a bunch of docs which aren't meant to be on the site out of the site build directory. New home is dev-docs (but can change)
• Fixes a bunch of links to notebooks that seemed to be unintentionally not included in the build. These are: census_duplicated_cells.ipynb, census_compute_over_X.ipynb

[codecov[bot]]

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 90.62%. Comparing base (36d98e8) to head (6ea8fe2).

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #1162 +/- ## ========================================== - Coverage 91.12% 90.62% -0.51% ========================================== Files 77 77 Lines 5892 5886 -6 ========================================== - Hits 5369 5334 -35 - Misses 523 552 +29 ``` | [Flag](https://app.codecov.io/gh/chanzuckerberg/cellxgene-census/pull/1162/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=chanzuckerberg) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/chanzuckerberg/cellxgene-census/pull/1162/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=chanzuckerberg) | `90.62% <ø> (-0.51%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=chanzuckerberg#carryforward-flags-in-the-pull-request-comment) to find out more.

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